Plant Pathology

<p>1. Detection of the Bacterial Potato Pathogens Pectobacterium and Dickeya spp. Using Conventional and Real Time PCR<br>Sonia N. Humphris, Greig Cahill, John G. Elphinstone, Rachel Kelly, Neil M. Parkinson, Leighton Pritchard, Ian K. Toth, and Gerry S. Saddler</p><p><p>2. Detection and Identification of Phoma Pathogens of Potato Denise A’Hara </p><p>3. Diagnosis of Ramularia collo-cygni and Rhynchosporium spp in Barley <br>Neil Havis, James Fountaine, Kalina Gorniak, Linda Paterson, and Jeanette Taylor</p><p><p>4. A Real-Time Multiplex PCR Assay Used in the Identification of Closely Related Fungal Pathogens at the Species Level<br>Dominie G. Wright</p><p><p>5. Diagnostics of Tree Diseases Caused by Phytophthora Species<br>Vincent Mulholland, Matthew Elliot, and Sarah Green</p><p><p>6. Real-Time LAMP for Chalara fraxinea Diagnosis<br>Jenny Tomlinson and Neil Boonham</p><p><p>7. Loop-Mediated Isothermal Amplification Procedure (LAMP) for Detection of the Potato Zebra Chip Pathogen ‘Candidatus Liberibacter Solanacearum’<br>Aravind Ravindran, Julien Lévy, Elizabeth Pierson, and Dennis C. Gross</p><p> 8. Loop-Mediated Isothermal Amplification (LAMP) for Detection of Phytoplasmas in the Field<br>Matt Dickinson</p><p><p>9. Diagnosis of Phytoplasmas by Real-Time PCR Using Locked Nucleic Acid (LNA) Probes<br>Sabrina Palmano, Vincent Mulholland, David Kenyon, Gerry Saddler and Colin Jeffries</p><p><p>10. Q-Bank Phytoplasma: A DNA Bar-Coding Tool for Phytoplasma Identification <br>Nicoletta Contaldo, Samanta Paltrinieri, Olga Makarova, Assunta Bertaccini, and Mogens Nicolaisen</p><p><p>11. High-Throughput Diagnosis of Potato Cyst Nematodes in Soil Samples<br>Alex Reid, Fiona Evans, Vince Mulholland, Yvonne Cole, and Jon Pickup</p><p></p>12. Detection of Nepovirus Vector and Non-Vector Xiphinema Species in Grapevine<br>Cyril Van Ghelder, Alex Reid, David Kenyon, and Daniel Esmenjaud<p><p></p><p>13. Molecular and Serological Methods for the Diagnosis of Viruses in Potato Tubers<br>Christophe Lacomme, Ross Holmes, and Fiona Evans</p><p></p><p>14. Immunocapture-Multiplex RT-PCR for the Simultaneous Detection and Identification of Plant Viruses and Their Strains: Study Case, Potato Virus Y (PVY)<br>Mohamad Chikh-Ali and Alexander V. Karasev</p><p><p>15. Snapshot and CE-SSCP: Two Simple and Cost-Effective Methods to Reveal Genetic Variability within a Virus Species<br>Agnès Delaunay, Sylvie Dallot, Denis Filloux, Virginie Dupuy, Philippe Roumagnac, and Emmanuel Jacquot</p><p><p>16. Detection and Characterization of Viral Species/Sub-Species Using Isothermal Recombinase Polymerase Amplification (RPA) Assays<br>Laurent Glais and Emmanuel Jacquot</p><p><p>17. Virus-Testing by PCR and RT-PCR Amplification in Berry Fruit<br>Stuart MacFarlane, Wendy MacGavin, and Ioannis Tzanetakis</p><p><p>18. Metagenomics Approaches Based on Virion-Associated Nucleic Acids (VANA): An Innovative Tool for Assessing without a Priori the Viral Diversity of Plants<br>Denis Filloux, Sylvie Dallot, Agnès Delaunay, Serge Galzi, Emmanuel Jacquot and Philippe Roumagnac </p><p><p>19. Detection of Potato spindle tuber viroid and Other Related Viroids by a DIG Labeled RNA Probe<br>Wendy A. Monger and Colin J. Jeffries</p><p><p>20. Microarray Platform for the Detection of a Range of Plant Viruses and Viroids<br>Ian Adams, Catherine Harrison, Jenny Tomlinson, and Neil Boonham</p><p><p>21. Multiplex Detection of Plant Pathogens Through the Luminex Magplex Bead System<br>René A.A. van der Vlugt, Henry van Raaij, Marjanne de Weerdt, and Jan H.W. Bergervoet</p><p></p><p>22. Next Generation Sequencing of Elite Berry Germplasm and Data Analysis Using a Bioinformatics Pipeline for Virus Detection and Discovery<br>Thien Ho, Robert R. Martin and Ioannis E. Tzanetakis</p><p><p>23. Metagenomic Next-Generation Sequencing of Viruses Infecting Grapevines<br>Johan T. Burger and Hans J. Maree</p><p><p>24. Droplet Digital PCR for Absolute Quantification of Pathogens<br>Ion Gutiérrez-Aguirre, Nejc Rački, Tanja Dreo, and Maja Ravnikar</p>